PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY66371.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 259aa    MW: 29026.7 Da    PI: 6.7915
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY66371.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.61.8e-27143232290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fYn+Y+ ++GF +r++++++skr+g+i+++ +vC+keg+r++ +++ ++k+ r r+ tr+gCka++ v+k++ gkw+vtk+++eH+H+l+
  GAY66371.1 143 FYNAYGMRLGFITRINYHTRSKRDGSIISQSLVCNKEGYRKPPSSRhEVKSIRLRPPTRVGCKAMISVRKMSFGKWVVTKFVKEHTHALS 232
                 ****************************************99887747788899**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MFFSKEELFI MEILVETIIQ NFLAAVDSRH GMGIQLKQND KDAQDKVSDD ANDNEQEDSI  60
LYSEIQLEQN SYEISGGTHF ITTDNEAHLG NEGTTIGSSV EMVSQVEKND KMTHSSGVQL  120
NTVGGDEPYV GQEFESVAAA HAFYNAYGMR LGFITRINYH TRSKRDGSII SQSLVCNKEG  180
YRKPPSSRHE VKSIRLRPPT RVGCKAMISV RKMSFGKWVV TKFVKEHTHA LSSTQGQTTV  240
LYRQIVVSSC PYTSRLVCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-45FAR1 family protein