PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY66372.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 249aa    MW: 27754.2 Da    PI: 7.0088
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY66372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.71.7e-27133222290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fYn+Y+ ++GF +r++++++skr+g+i+++ +vC+keg+r++ +++ ++k+ r r+ tr+gCka++ v+k++ gkw+vtk+++eH+H+l+
  GAY66372.1 133 FYNAYGMRLGFITRINYHTRSKRDGSIISQSLVCNKEGYRKPPSSRhEVKSIRLRPPTRVGCKAMISVRKMSFGKWVVTKFVKEHTHALS 222
                 ****************************************99887747788899**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEILVETIIQ NFLAAVDSRH GMGIQLKQND KDAQDKVSDD ANDNEQEDSI LYSEIQLEQN  60
SYEISGGTHF ITTDNEAHLG NEGTTIGSSV EMVSQVEKND KMTHSSGVQL NTVGGDEPYV  120
GQEFESVAAA HAFYNAYGMR LGFITRINYH TRSKRDGSII SQSLVCNKEG YRKPPSSRHE  180
VKSIRLRPPT RVGCKAMISV RKMSFGKWVV TKFVKEHTHA LSSTQGQTTV LYRQIVVSSC  240
PYTSRLVCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-45FAR1 family protein