PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY66415.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 240aa    MW: 27238.6 Da    PI: 9.2162
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY66415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.93.2e-07115134322
                 S---SGGGGTS--TTTTT-S CS
     zf-CCCH   3 telCrffartGtCkyGdrCk 22 
                  + C+f+++tG C++G rC+
  GAY66415.1 115 KAYCPFHLKTGACRFGQRCN 134
                 578****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MEDNECRDGG KKILTRILQS GGGDAENLQH ILRLLTSYGM FSEHREFGDE RRMNVMRMMI  60
GNMLAKGLLK LYGKEMRLLS GRKRPTSNPL PPQSEAFADH QNAQQALEIV AQQDKAYCPF  120
HLKTGACRFG QRCNIVHFYL DKSCTLLIKN MYNGLGLAWE QDERLEVCRN GSSHLRGNVY  180
VHYKSLESAV LAYHSVNGRY FAGKQVFVKN CWSLLSTLYL FVLYKTSVVK LTACLLGGCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10320.14e-59C3H family protein