PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY66610.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 252aa MW: 28396.5 Da PI: 5.5189

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY66610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.1	5.7e-20	11	56	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ll+++v+++G ++W+ I++ ++ gR++k+c++rw + GAY66610.1 11 KGPWSPEEDQLLLKLVQRYGARNWSVISKSIP-GRSGKSCRLRWCNQ 56 79****************************.*********985 PP
2	Myb_DNA-binding	58.8	1.2e-18	65	107	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T++Ede++++a++++G++ W+tIar ++ gRt++ +k++w++ GAY66610.1 65 TFTPDEDEIIIKAHARYGNK-WATIARLLN-GRTDNAIKNHWNST 107 69****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MDRDSVSERV KGPWSPEEDQ LLLKLVQRYG ARNWSVISKS IPGRSGKSCR LRWCNQLSPE 60 VEHRTFTPDE DEIIIKAHAR YGNKWATIAR LLNGRTDNAI KNHWNSTLKR KYAETTRSAL 120 AAGVDEDSED SDEREKKRSA VSVSGISCSP SGSDVSDSGL PVRVFESESR YNEVFDVSTD 180 LTLGLPVTEL KKCDSVSQRE NDSDDDKTSN TPSFGPEFLS VMQEMIRNEV RNYMEEAVRN 240 AGFKRIGISK ID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	6e-64	MYB family protein