PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY66715.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YB

Protein Properties

Length: 143aa MW: 16254.4 Da PI: 6.2891

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY66715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	47.3	5.1e-15	11	104	6	94
NF-YB 6 rflPianvsrimkkvl....P.anakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 ++lP + v r++k l P ++ + kda e + fi ++++ a+d c++ kr+tin++d+l a+ ++ f+++v+pl+ l ++r+ + GAY66715.1 11 EELPKTIVRRVVKDKLhdcsPdTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTINAEDVLKAIEEIDFNEFVDPLRDSLDEFRQKN 104 56888889999998873332212335567888888888999**************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
METEKVVPEA EELPKTIVRR VVKDKLHDCS PDTDISVHKD ALLAFCESAR IFIHYLSATA 60 NDICKESKRQ TINAEDVLKA IEEIDFNEFV DPLRDSLDEF RQKNAGKRAG TSKSKEEKKK 120 QKVEGEASKK SCGKTEKDKK NEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	3e-46	NF-YB family protein