PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY66806.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 259aa    MW: 29218.5 Da    PI: 9.5318
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY66806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-1197144355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h ++Er+RR+++N+ f  L  ++P       k ++Ka++Le +++++k+Lq
  GAY66806.1  97 QEHVIAERKRREKMNQQFIALSAVIPGI-----KQMNKASVLEGTIKHLKELQ 144
                 6799**********************97.....57*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDVDQDSTFI HQYQGNSQSN STTHGSMSFS GLISFQDTDS LASYYSQMSN PNSEYYCTIK  60
SEDKRASDEN LMAMKTRIVN KPGQGNRVAS RSPLQAQEHV IAERKRREKM NQQFIALSAV  120
IPGIKQMNKA SVLEGTIKHL KELQEREKKL VEQTKRKALE SVVSVKGSQQ TLPDIVVRVS  180
DNNVLIRIHC EKQNIGFISN ILSEIEKLHL VVINSRTIPF GNYALDITVV AQMEVEFCLT  240
VKELVKNLRL ALSKFIKLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103108ERKRRE
2104109RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-50bHLH family protein