PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67460.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 195aa MW: 22659.7 Da PI: 9.3385

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	87.8	2e-27	8	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 lp Gf+F+P+deel+ +yLkkkv+g ++l+e i+++++y+ +P+++ + + ++++yfF++ +kk+++g+r r++ g+W+ k++ GAY67460.1 8 LPHGFQFRPSDEELIEHYLKKKVSGIFIPLAEYfIRDCNLYEKKPSEIWDshggPFLNADEDLYFFTQLKKKSSKGSRIDRKVGssGGTWQGEDAGKDI 106 699**********************9998888**********632455333478899**************75544899****** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s ++ ++g kk + + k + + W+mhey+l GAY67460.1 107 VSGqSKIKIGSKKRFRYEK--QGCEDHGAWIMHEYTL 141 99745667****984..4444589*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MQEHRPFLPH GFQFRPSDEE LIEHYLKKKV SGIFIPLAEY FIRDCNLYEK KPSEIWDSHG 60 GPFLNADEDL YFFTQLKKKS SKGSRIDRKV GSSGGTWQGE DAGKDIVSGQ SKIKIGSKKR 120 FRYEKQGCED HGAWIMHEYT LHLPKNQAAN YVLCRLRKNQ PSGHDIMNRF SWNIAKHDDW 180 FTTPSSIRIH ITCAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	6e-18	NAC family protein