PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67801.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 442aa MW: 51683.6 Da PI: 6.6968

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.1	5.1e-17	58	131	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn YAke GF r ++ + ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++eleHnH l+p GAY67801.1 58 FYNCYAKEQGFGSREKY-----------RGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMETKRWRIIEVELEHNHLLSP 131 9********988764...........4578*****99888.....*********************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MDEVSLNTEP VGDDDTDDFE VVGDFAMTEY VGQTRIIQNP LPPAVGMEFE TYDDVYYFYN 60 CYAKEQGFGS REKYRGKLSC SSAGFKKKSE ANRPRPETRT GCPAMIKFRL METKRWRIIE 120 VELEHNHLLS PRSGKFCKSH KHIGIGTKRT LHLDSAEEVQ KIKLPEKFEA AWEDMIQRHG 180 IKDHRWIQTL YEDRKRWAPI YLKEAFLSGV FSFLQNEVST SYFEGYLDKN TPLKEFLDKY 240 DQALQANYQL EALADMDSRN SSCIQKPRCY YEFQLSKLYT NEMLRKFQKE VEAITKHVSA 300 DGPITYIVKE EFEVGSNEKD SRAFDTLYNA SNLEVLCVCG LFNFRGYLCR HILCVLNQSG 360 VQEIPSQYIL SRWRKDVKRS YVLNHSCSGV DIKNQVHRYD DLYKRIVQVV EEGRQSQDRY 420 KVTLQALDEI LNKLHLVEDH QV

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MDEVSLNTEP VGDDDTDDFE VVGDFAMTEY VGQTRIIQNP LPPAVGMEFE TYDDVYYFYN  60
CYAKEQGFGS REKYRGKLSC SSAGFKKKSE ANRPRPETRT GCPAMIKFRL METKRWRIIE  120
VELEHNHLLS PRSGKFCKSH KHIGIGTKRT LHLDSAEEVQ KIKLPEKFEA AWEDMIQRHG  180
IKDHRWIQTL YEDRKRWAPI YLKEAFLSGV FSFLQNEVST SYFEGYLDKN TPLKEFLDKY  240
DQALQANYQL EALADMDSRN SSCIQKPRCY YEFQLSKLYT NEMLRKFQKE VEAITKHVSA  300
DGPITYIVKE EFEVGSNEKD SRAFDTLYNA SNLEVLCVCG LFNFRGYLCR HILCVLNQSG  360
VQEIPSQYIL SRWRKDVKRS YVLNHSCSGV DIKNQVHRYD DLYKRIVQVV EEGRQSQDRY  420
KVTLQALDEI LNKLHLVEDH QV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	4e-81	FAR1 family protein