PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY67965.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 68aa    MW: 7647.23 Da    PI: 11.2242
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY67965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.27.9e-171660145
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                k+ie +  r vtfskRr+g++KKA+E    ++ ++av++fs+ g+
  GAY67965.1 16 KKIEKQKARMVTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGN 60
                68****************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    
MKMAPTGKGK LKIEIKKIEK QKARMVTFSK RRQGLFKKAQ EYANITGSQI AVLVFSPAGN  60
PYFMVTVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.17e-12M-type_MADS family protein