PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY67972.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 235aa    MW: 26745 Da    PI: 6.7978
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY67972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.71.8e-0947756128
         NAM  56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + +yfF++ +k++++++r n ++    W+   + k vl+   +++  g kk + +   r++  ++ +W+mhe+++
  GAY67972.1   4 QALYFFTQLKKASPKDSRFNIKIGLDAWQGEDRAKLVLTVgsEDQILGFKKRFRYE-SRENLEQNGRWIMHEFTI 77 
                 568******************99999******99999998667777********97.6777779*********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MAGQALYFFT QLKKASPKDS RFNIKIGLDA WQGEDRAKLV LTVGSEDQIL GFKKRFRYES  60
RENLEQNGRW IMHEFTINPA LLGDQYSHKA RNFVLCRVKK NKLENHLEKA NLGGKRSSGS  120
KRKLKEVVTS SSHIDHDDEC FQSKRLKAHQ NSVLIEQSHS PCSSSSLHTV EHQGEIDNIL  180
EIVEFEVEID YLPNRLVFNV QEFLSELDQI AEPRDEEKGD GAAAGRVSIE SQSST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.18e-07NAC family protein