PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY68388.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 106aa    MW: 12858 Da    PI: 11.3417
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY68388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.52e-101455148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l  ++ ++G  +W+     ++  +++k+c++rw +yl
       GAY68388.1 14 KGAWSKEEDDKLRAYILKYGHWNWAQ----LP--KSGKSCRLRWMNYL 55
                     79******************778877....99..89**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MVRAPTYDGR GMKKGAWSKE EDDKLRAYIL KYGHWNWAQL PKSGKSCRLR WMNYLRPDIK  60
HGNYTKEEET KRKRLHQGRN TQLLKRLRFM KAKRQKKRNQ NNVVLV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17296RKRLHQGRNTQLLKRLRFMKAKRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-27MYB family protein