PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY68653.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

DBB

Protein Properties

Length: 236aa MW: 25586.9 Da PI: 6.2876

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY68653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.4	2.2e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC dC + H+ H++ pl GAY68653.1 4 QCNGCEAAEAKVLCCADEAALCWDCDRKVHSAnmlakkHQRLPL 47 6****99*******************66888888988775 PP
2	zf-B_box	29.2	1.9e-09	52	95	1	38
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 s+++kC+ ++e +fC +++ l+C++C +++H H+ GAY68653.1 52 SQMPKCDICQETTGYFFCLEDRALFCRKCDVAIHTTnayvsgHQ 95 689******99*******************5555666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MRIQCNGCEA AEAKVLCCAD EAALCWDCDR KVHSANMLAK KHQRLPLSHS SSQMPKCDIC 60 QETTGYFFCL EDRALFCRKC DVAIHTTNAY VSGHQRFLLT GVKVGLGATE PCVSTTMNKS 120 DSIENASETE SSQPISKRNA SIPTACEANG MLHGQIGRVE TVSAPATSKM PSVTGDTTTV 180 NNIPDWHLDD YLTPTDFSPN YVLMDNLSFS KSHSAFGGVV RALGGQQFEP PQVQCG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-66	DBB family protein