PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY69328.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 261aa MW: 30152.2 Da PI: 9.9615

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY69328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	137.5	8.5e-43	20	150	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppG+rF Ptd+elv +yLk+kv +k l+ + i ++++y++ P+dL + ++++eek +yfF++rd+ky++g+r+nra+ +gyWkatg d+ + + GAY69328.1 20 PPGYRFCPTDKELVLDYLKNKVMNKLLPP-NKIMDINLYNHGPQDLSAiyrekmRIEQEEKTLYFFTPRDRKYPNGTRPNRAAGRGYWKATGVDNIIGR 117 9***********************999.77**********85567766666677788**************************988887 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 k++ +g +k+Lv+y+g +k++kt+W+mheyr+ GAY69328.1 118 -KENPIGYRKSLVYYQGYPKKSKKTNWIMHEYRI 150 .999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MVNVEQQQRV ATLKYLNSFP PGYRFCPTDK ELVLDYLKNK VMNKLLPPNK IMDINLYNHG 60 PQDLSAIYRE KMRIEQEEKT LYFFTPRDRK YPNGTRPNRA AGRGYWKATG VDNIIGRKEN 120 PIGYRKSLVY YQGYPKKSKK TNWIMHEYRI DHKSPARSST AAPHDMKLDD WVLCKVYLKD 180 KKSDKDNREA TSINTDATST NPSISSSISQ SPPLLMQTTY NYSNVPYVHG STSSATPPLH 240 QGNNNFLHST IPLFFFEPNM N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	4e-53	NAC family protein