PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY69330.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 167aa    MW: 19490.3 Da    PI: 10.1786
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY69330.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM131.27.5e-41201462127
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 p+G+rF Ptd+ +v +yLk+kv +k+l+  + i ++++y++ P+dL  k  ++++eek +yfF++rd+ky++g+r+nra+ +gyW+atg d+ + + k+
  GAY69330.1  20 PQGYRFCPTDKVIVLDYLKNKVMNKPLPP-NKIMDINLYNHGPQDLSeKqmCIEQEEKTLYFFTSRDRKYPNGTRPNRAAGRGYWEATGVDNIIGR-KE 116
                 89************************999.77**************74345677788899******************************988887.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyr 127
                 + +g +k+Lv+y+g  +k++kt+W+mhey 
  GAY69330.1 117 NPIGYRKSLVYYQGYPKKSKKTNWIMHEYG 146
                 9****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
TVNVEQQQRV ATLKYLNSFP QGYRFCPTDK VIVLDYLKNK VMNKPLPPNK IMDINLYNHG  60
PQDLSEKQMC IEQEEKTLYF FTSRDRKYPN GTRPNRAAGR GYWEATGVDN IIGRKENPIG  120
YRKSLVYYQG YPKKSKKTNW IMHEYGIDHK SPARSSTAAP HDMKVRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-43NAC family protein