PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY69382.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 119aa    MW: 13749.5 Da    PI: 6.5115
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY69382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF33.84.4e-112331849
                HHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF 18 ngilKKAeELSvLCdaevaviifsstgklyey 49
                +gi KKA EL +L++ e+av++fs++gk y++
  GAY69382.1  2 AGIYKKACELVTLTGSEIAVVVFSQSGKPYTF 33
                69*****************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MAGIYKKACE LVTLTGSEIA VVVFSQSGKP YTFGHHSVEA VANRFLGMNQ LPNDNVHSLV  60
VGHSQVRINE LNQQHNELRR QLDEEKEQEK MLTQMRRGKE TQPRWWETPV DEHNLQELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-23M-type_MADS family protein