PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY69427.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 318aa    MW: 35334.2 Da    PI: 6.3519
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY69427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.63.9e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l++++++ G+g +W + +++ g+ R++k+c++rw++yl
       GAY69427.1 14 KGPWSPEEDAKLKEYIEKNGTGgNWIALPHKAGLMRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding41.23.8e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g ++ +Ed ++  +++  G++ W+tIa+ ++ gRt++++k++w++
       GAY69427.1  69 GEFSDDEDRIICSLFASIGSR-WSTIAAQLP-GRTDNDIKNYWNT 111
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KNGTGGNWIA LPHKAGLMRC GKSCRLRWLN  60
YLRPNINHGE FSDDEDRIIC SLFASIGSRW STIAAQLPGR TDNDIKNYWN TKLKKKLIGI  120
VNQQSQIKTH QAAVSSFSSL FQTSSSSSSS SSPSPSPTIS YNCNDINAYY TTTARSFTGL  180
ERNSSFSNSL LLSSNSCITA QHQVKEKIFM FGGDQASFSS SDGSCSNQQI SHGKEFDYEY  240
YGGRNNKCEQ MGLQNNLFYN GVEGDNKFMI SNVETPLDYG LEEIKQLISS SSSSCNNFLF  300
DENKTEESLV LLNDADCE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.12e-75MYB family protein