PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG42186.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 248aa    MW: 27655.6 Da    PI: 7.0339
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG42186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.31.9e-08147221270
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ +e laL +  +e++  + + +      ++  + ++ +++m+e g++rs++ +++kw +l+++y +i +  ++
  GBG42186.1 147 WSLEERLALAKYMQEDDAMMAAVQprqkhqRRSVRNDWMARRMKEDGYHRSAEDVRKKWADLQNKYGEIHDKCRG 221
                 888888888888887777777532222232667788899***************************999988775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAGEAAFYDQ RNDCRGYGMA GHFERPRFDN RGRPPLNAAP YVPPDTPPSN SFQPPAEGYP  60
FPTMSEHPVS MSCDASDNEP VSTPQCGQGT QQPIDAQPPA TSAPSSTGGR ASGRKPRQGR  120
QAAPRSPGAD GDTEDDGEGG KQKKKSWSLE ERLALAKYMQ EDDAMMAAVQ PRQKHQRRSV  180
RNDWMARRMK EDGYHRSAED VRKKWADLQN KYGEIHDKCR GSGKPSFWDM PAEDKKREGL  240
TFLLEEEL