PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG42291.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 156aa    MW: 17616.6 Da    PI: 6.5238
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG42291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.93.9e-1179148264
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                 W+ ++  aLi+a+r+ + +l+       r k ++ +W++v +++++ g+er++ +  +kw+n+ +++kk+
  GBG42291.1  79 WSVDHMVALIRAKRDQDAHLQgmghtcaRMKPREWKWADVEERLKKVGVERTADKGGKKWDNVMQQFKKV 148
                 99************77777774443333568999**********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MADKEPAVVD CDDYDDVASD DERWDDETTD VQQIWQKTMG GRSRMTKGSS STVRRGKKGT  60
AAGSEGEGDV EGEAMRNFWS VDHMVALIRA KRDQDAHLQG MGHTCARMKP REWKWADVEE  120
RLKKVGVERT ADKGGKKWDN VMQQFKKVHL FQGSPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-08Trihelix family protein