PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG46497.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 178aa    MW: 19722.9 Da    PI: 10.6176
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG46497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.53e-12100174269
    trihelix   2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+ ++  aLi+a+r+ + +l+++         ++ +W+ev +++ + g+ r + +C++k++n  +++kk+ + ++
  GBG46497.1 100 WSVDHMIALIRAKRDQDAQLQASGhafahmrTREWKWAEVQERLLKVGVDRPADKCRKKFDNRMQQFKKVHNFMR 174
                 99*******************87334444449*************************************987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MRQQKANSIT SGVQRLTVGG RDADEAGVGG GLASADNGEG HWSQPEEDTA EAFPLRPPNM  60
GGRGGRRRAA KAPDHHRRKA VAGGANGDGD VDDEGGRNFW SVDHMIALIR AKRDQDAQLQ  120
ASGHAFAHMR TREWKWAEVQ ERLLKVGVDR PADKCRKKFD NRMQQFKKVH NFMRESGK