PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG59162.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 436aa    MW: 47309.1 Da    PI: 9.068
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG59162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.24.8e-09366965
    trihelix  9 aLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkik 65
                aLi+a+r+ + +l+ +       k ++ +W++v +++ +  + r +++C +kw+nl +++kk+ 
  GBG59162.1  3 ALIRAKRDQDVQLQMAghafaqmKGREWKWADVRERLLKVDVDRPAEKCGKKWDNLMQQFKKVH 66
                89*****9999888542333333688999*********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MVALIRAKRD QDVQLQMAGH AFAQMKGREW KWADVRERLL KVDVDRPAEK CGKKWDNLMQ  60
QFKKVHCFQG ESGKEDFFQL SAKERLARGL NFNMDRAVYE EIKASTTRSH TMHLQNVADT  120
GRVGDVQLPF GSSGGPESVS DGESDAGGDG NDEDDSSTRG CSQTTGSPGG ARKRKNMRQQ  180
TFEALTECME KHGTLMASTM ESASKGQCSI QIRQCKAMEA EMEVQKKRYV ASDEVSKMMC  240
HALMEIVKAI RDRAGQAKRG RDVLENVMPV VEKKGRHQAK KRKAVAGGPS NAGKNVREEW  300
VNDGESTKED DAIQSGEEEA VARKGSLRTR GALKINGTGA AQAAHQPRGG GAREREDVVI  360
DVDAGVAPRE VRGMASITEV RTAGALTRTR TTTPPEGDPS VRAPSSPATP RQQPVKDDGG  420
GSNTVVQGSG VALFPA