PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG59240.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 437aa    MW: 47884.1 Da    PI: 6.6443
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG59240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.61.8e-09157232169
    trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 rW +  +  L + r+e++  +++++       lk++ W+ v ++  ++g++r   qCk+k++++  +y+ +k++e+
  GBG59240.1 157 RWGETGIEWLCRYRNEVKVLMGEEAevygrarLKAGFWKYVEERTCAKGYNRVDDQCKNKFNQILDYYRTLKAHES 232
                 67777788888888866666665322333333****************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MLLVGDGSGG MSTEPLCDGA LRQKLSLHAA SSEYVLNRII RDIGAGVHPM EHVNGGRVGG  60
HVVASQITPS HTPPWCGSSD GAAAGTPPPF TRESASNHTP PRCGSSGGVP ADTPSPLIRD  120
GCSHTPPTRE QGPRTSTGGP SEGHPRQPCP GEKNTDRWGE TGIEWLCRYR NEVKVLMGEE  180
AEVYGRARLK AGFWKYVEER TCAKGYNRVD DQCKNKFNQI LDYYRTLKAH ESWSGLPSYW  240
DMNQTRRKKY NVDFVLRRSW YDVIDPAEKD KDSINLSNLM DSWADEERLE DGEGVNDADG  300
EMDGGGEHPA AGSAGSAGGS QSTGFEPTLG KRKRTASNAR ESGVQAVTVA MRAHTTALTQ  360
SDLTIAKMRC EATRDITKQQ AEVHRELVQQ DIASRERIAN MMGDKVEKGY FVFVDAIRSL  420
RFRTNSPCSD PDINESR