PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG59248.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 481aa MW: 52329 Da PI: 6.0308

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG59248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.7	1.1e-11	260	335	1	69
trihelix 1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 rW + e+laLi a e+++++++ ++We +s ++ + gf r+ C+++w+nl k y+k+ +++ GBG59248.1 260 RWNDAETLALIHAHIeyrvaraVNSEAIGNACSLNKKWEGISTAVCAAGFIRNGYDCENRWKNLWKWYRKVLVHDG 335 8********997755555546666666789************************************865555 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MEALRTVGNS GSVFSGHEPP RSGPSVAHTT SGVDPVPHSF VASSSDQRSL EDMREYLHRR 60 AMRSSSNKDE TEVSPSIDAH TFSMPQWSTE QLQEQPLLSP QSSVGGVGGV DMSQLGVDVS 120 QLESQVVCNM PQRSLLSAFD EVVQQTSHSL PTAGLGPSGT VVLSDQELGV GSVDWAGDCG 180 NGLPHQMGGG DDDYADSQAG ADSQAGGDRG HHETEGSVQA RGTPGEEQPW VGEEQHLPPP 240 IASDGAVPGN GGDGCHRNRR WNDAETLALI HAHIEYRVAR AVNSEAIGNA CSLNKKWEGI 300 STAVCAAGFI RNGYDCENRW KNLWKWYRKV LVHDGMSGVQ SYWTCHLRHE RMLDSRSAFE 360 GPGLISLTPS ILETRFGNVS KAQTHYRKCR EQAVKDISAV MREQTDALRE HNRRSVECAE 420 LTVKAMYKQA AVQQQIGKLT AKVAQEDMAI RKEIGLLMAE KLEKGWNTFA QALRDSRSSS 480 S

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MEALRTVGNS GSVFSGHEPP RSGPSVAHTT SGVDPVPHSF VASSSDQRSL EDMREYLHRR  60
AMRSSSNKDE TEVSPSIDAH TFSMPQWSTE QLQEQPLLSP QSSVGGVGGV DMSQLGVDVS  120
QLESQVVCNM PQRSLLSAFD EVVQQTSHSL PTAGLGPSGT VVLSDQELGV GSVDWAGDCG  180
NGLPHQMGGG DDDYADSQAG ADSQAGGDRG HHETEGSVQA RGTPGEEQPW VGEEQHLPPP  240
IASDGAVPGN GGDGCHRNRR WNDAETLALI HAHIEYRVAR AVNSEAIGNA CSLNKKWEGI  300
STAVCAAGFI RNGYDCENRW KNLWKWYRKV LVHDGMSGVQ SYWTCHLRHE RMLDSRSAFE  360
GPGLISLTPS ILETRFGNVS KAQTHYRKCR EQAVKDISAV MREQTDALRE HNRRSVECAE  420
LTVKAMYKQA AVQQQIGKLT AKVAQEDMAI RKEIGLLMAE KLEKGWNTFA QALRDSRSSS  480
S