PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG59643.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 324aa    MW: 34732.4 Da    PI: 4.9987
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG59643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.42.4e-10216291270
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ +e l L++  r+ +e++ ++       k k+ +W +++k+m+++g+ ++   C ++wen+ + y++i ++ek+
  GBG59643.1 216 WSLDESLILVRCERDYDEAIAAAgsnfarmKNKEWKWTDIAKRMSAQGVVKGWDACMKRWENVIGWYRRIFDREKD 291
                 999999999999997777777542333333799*************************************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MSEGARTVMQ GAASEGAMET LLYSNGRHGM CQPLDLQLSS GGQRAVTRTV LVDDPSQSTG  60
DPSVGAQGGR CSRSHASHAE PAMTAYRGGC CQQSEFSPVV GAPSGAAAGV QRTGQSASLP  120
SMTRCAKRII ARDWMMRATS DGEREVKGDD YGDGAADGDD MDDVEGNTED EPSLPPGAQN  180
TGGGAQTGVG RGREKGNVRV VSADGGDGTS GGCTYWSLDE SLILVRCERD YDEAIAAAGS  240
NFARMKNKEW KWTDIAKRMS AQGVVKGWDA CMKRWENVIG WYRRIFDREK DSGPGNFVVT  300
SVSGDEMEFS YANHQLRTLW MREK