PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG59878.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 513aa MW: 56335.2 Da PI: 6.2575

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG59878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.5	9.7e-10	4	46	27	69
trihelix 27 kkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 ++ +We+v ++++ g++r+++ C++kw+nl +++kk+ + ++ GBG59878.1 4 REWKWEDVRARLQTMGVTREAVDCRKKWDNLMQQFKKVHKFQN 46 5679*********************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MKTREWKWED VRARLQTMGV TREAVDCRKK WDNLMQQFKK VHKFQNLSGG KDYFKLASKA 60 RRSEGFSFVM DRSVHDEMEA MTKGDHTIHP KNLAVTGAAG GVHMPAGAGA GGDTMGSEGG 120 GEATDEEQGS TKDSTFSAGS GYGYGKRKNM RQQTFEAVAE EVVIDVGDED DEPLESHRKR 180 NVTQGATATT IRIRGATEER PPQGGLPSTL SQPRPCNTAA KGGSMERGGG EGAQQEERVA 240 SGVVIAGATA GSSSNVAAVA RAREELAVVE REVTRGDNKG EREDEDRLLS RVRRGGMAKD 300 VAECDRLWVD DKAFWTTGEG RRLYNIVHET REYFVAIASG LPAPTVSRSV VMPKSATTLT 360 RIADPSRLQQ AIFRATTTEN ISLRVLHRWV FKSGNRPRGY NLAFQYALES VATDIACVMW 420 YGEEWSNVVS AAVCVHTIDL NMDLPLWFAA ANIEDRPEDD DMAAHQESTV ICISHACRVA 480 LQMGGNVNDE FISHDLLSRI VDCFRLLWLP VCG

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MKTREWKWED VRARLQTMGV TREAVDCRKK WDNLMQQFKK VHKFQNLSGG KDYFKLASKA  60
RRSEGFSFVM DRSVHDEMEA MTKGDHTIHP KNLAVTGAAG GVHMPAGAGA GGDTMGSEGG  120
GEATDEEQGS TKDSTFSAGS GYGYGKRKNM RQQTFEAVAE EVVIDVGDED DEPLESHRKR  180
NVTQGATATT IRIRGATEER PPQGGLPSTL SQPRPCNTAA KGGSMERGGG EGAQQEERVA  240
SGVVIAGATA GSSSNVAAVA RAREELAVVE REVTRGDNKG EREDEDRLLS RVRRGGMAKD  300
VAECDRLWVD DKAFWTTGEG RRLYNIVHET REYFVAIASG LPAPTVSRSV VMPKSATTLT  360
RIADPSRLQQ AIFRATTTEN ISLRVLHRWV FKSGNRPRGY NLAFQYALES VATDIACVMW  420
YGEEWSNVVS AAVCVHTIDL NMDLPLWFAA ANIEDRPEDD DMAAHQESTV ICISHACRVA  480
LQMGGNVNDE FISHDLLSRI VDCFRLLWLP VCG