PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG60140.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 488aa    MW: 53291.5 Da    PI: 7.4165
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG60140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix353.7e-11232309271
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkr 71 
                 W  +  l+L++ +r++++++ ++       k k ++W e++++m+++g+ ++  + C ++wen+ + y+ki ++ek+ 
  GBG60140.1 232 WDLDDSLLLVRCKRDLDDHMASQgsnfarmKTKTQKWNEIANRMAQQGVtNKDGESCMKRWENIFGWYRKIWDREKDS 309
                 8888899999999988888875323333337*****************9788*********************99973 PP
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    
MMRFGCHPSS RLGVDTNLLR DLPLDQITAA RGWGRCPPSW RIPGGGGSDP LRLHLSPSCT  60
MDASRTVPVD HSSRSQGGVS VTMQDAREDG AVTQRPPMSS SACRVSHAVS PSSFDPGRSP  120
LTHNGPAGTV TRASVAESPQ VIERIIARYS RMRTDVQADD GGAKGAEAEE VAEGECTDVE  180
DESEEDDDVL LKEVTPKTTK KKTTKSRGKS KARDGGGDGD GAAGGGRNSK NWDLDDSLLL  240
VRCKRDLDDH MASQGSNFAR MKTKTQKWNE IANRMAQQGV TNKDGESCMK RWENIFGWYR  300
KIWDREKDSG VQSFFLMTSK KRKELGYKFA MDRQLYDVIH AITPNNQAIH PPNLCDTGGL  360
PPQQADDSEQ SQARGATVGG ETSVGNNMER ESADGYGSRS SGGMAAGKRK NARQLAFDAV  420
TDVMKTHPTF VVDSVDRASK RQCDVLQRQC DIMEREARMQ EKQCDMLDAG QRMLCDALLK  480
IASALAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-06Trihelix family protein