PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG60633.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 347aa    MW: 37182.7 Da    PI: 4.6091
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG60633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.42.2e-09171243167
    trihelix   1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 
                 rW + e+laLi+a          + e+++++++  ++We +s+++ + gf  +   C++kw+nl + y+k+  +
  GBG60633.1 171 RWNDAETLALIRAHGeyrvaraVDSEAIGNACSLNKKWEGISAAVCAAGFC-NDDDCENKWKNLWRWYRKVLVH 243
                 8************9977777767777777889******************6.5689*************98555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MPQRSMEQLQ EQPLLSPHSS VGRVGGVDMS QQGVDVSQLE SQAVCDMPQC SLLSASDEAV  60
QQTGHSLPTA GLGPSGTVVL SDQELGFGSV DWPGDCGNGL PYQMGGGDED CADSQAGGDR  120
GHQQTEGRVQ ADGTPGEKQP WVGEEQHLSP PPACDGAVPA NGGDGCQRNR RWNDAETLAL  180
IRAHGEYRVA RAVDSEAIGN ACSLNKKWEG ISAAVCAAGF CNDDDCENKW KNLWRWYRKV  240
LVHDRISGVQ SYWTMSPEER ANDGLKFRLR RSRFDLIDSF NMRNPTVHPE GVVDPGDEED  300
GRGPGQRSQG SPPVSGGRAE SGVDDAHAEG AEVGMSAKRR CTVANAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-06Trihelix family protein