PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG61384.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 547aa MW: 60800 Da PI: 7.4567

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG61384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.7	1.7e-09	88	164	2	71
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 W+ +e l+L++ +r+ +e++ ++ k ++ +W ++s +m++ g++++ C ++wen+ + y k+ ++ek+ GBG61384.1 88 WSLDESLVLVRCKRDQDEAMVAAgstfariKTREWKWTDISTRMSAYGVHKEWDACMKRWENVIGCYGKVWDREKES 164 9***********9998888653344444699***********************************9999974 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MERIIAHVST MRAGSDGDST DNGEMYGEGD GLNDDDMVGG GEDDANVQPP PTAEGRIDGG 60 LGRGKGRGKA KVPGGDAGVA SSGGRTFWSL DESLVLVRCK RDQDEAMVAA GSTFARIKTR 120 EWKWTDISTR MSAYGVHKEW DACMKRWENV IGCYGKVWDR EKESGMQSLF TMTPKERAEK 180 GYKFQMDRRL YDAVHAMQHR SQTAHPPNLV DTGASQQQQG GGAGADGVQG GETSASDNCE 240 GGAGDTNGVE PSGGPKIVKR KSARQNAFEA VTDVMQSHSK VVAESVDRAS KRQCEVLQRQ 300 CDIMEREVEA QEKQCYVWES GQRMLCDATM VGARACIHHR SVMVYELRHR RGDTRGREMQ 360 FRHVCSRSDV RHYEAXSNGA TCLRLTAGLG YLRRALREVV IYTAKVGNQI PNRRDADVXV 420 LREIVEVFVS SLAMEHQERL HHPASYSVIL EPPLEGGGTC IGKWRFYEMT CSVDVSTARE 480 RERERREGRG GLLCVIVRIW PSLCKHGRGR IEVLYDRRQW VEYEICALCV VVQIFVQNLG 540 TLFSALA

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MERIIAHVST MRAGSDGDST DNGEMYGEGD GLNDDDMVGG GEDDANVQPP PTAEGRIDGG  60
LGRGKGRGKA KVPGGDAGVA SSGGRTFWSL DESLVLVRCK RDQDEAMVAA GSTFARIKTR  120
EWKWTDISTR MSAYGVHKEW DACMKRWENV IGCYGKVWDR EKESGMQSLF TMTPKERAEK  180
GYKFQMDRRL YDAVHAMQHR SQTAHPPNLV DTGASQQQQG GGAGADGVQG GETSASDNCE  240
GGAGDTNGVE PSGGPKIVKR KSARQNAFEA VTDVMQSHSK VVAESVDRAS KRQCEVLQRQ  300
CDIMEREVEA QEKQCYVWES GQRMLCDATM VGARACIHHR SVMVYELRHR RGDTRGREMQ  360
FRHVCSRSDV RHYEAXSNGA TCLRLTAGLG YLRRALREVV IYTAKVGNQI PNRRDADVXV  420
LREIVEVFVS SLAMEHQERL HHPASYSVIL EPPLEGGGTC IGKWRFYEMT CSVDVSTARE  480
RERERREGRG GLLCVIVRIW PSLCKHGRGR IEVLYDRRQW VEYEICALCV VVQIFVQNLG  540
TLFSALA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-06	Trihelix family protein