PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG61824.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 571aa MW: 62935.4 Da PI: 7.7206

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG61824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.7	7.1e-09	330	389	8	67
trihelix 8 laLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 +L++a+r+ + + ++ +We+v + +++ ++r+ + C++kw+nl +++kk+ + GBG61824.1 330 ITLVRAKRDQDLYFAGMGPREWKWEDVRSTLQKMDVTRKVVDCRKKWDNLMQQFKKVHKF 389 5799999999999999999*************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MWSCCPFQGP YIGDLLHRLP LVLLAVVLLL IVVFFHVCFV GLLPVAARKR RSSKNDDRMD 60 RRLTNDRLAG TTVATSNRQC TTGSVAKQAY DPTLYAHLPS HEIPQLPSDD EGEDIRSSIV 120 SLGSGSTQDW AATQSYGGRR AETPWSYTSL LNEGLCDDDG NAAVDLNFQL SSSSGAAATH 180 TRIINPHPDG DRADLNRFAR AAGIEMCPRG MAEEESVRIN VRNGCAYHLR RETDPRLRVD 240 GSDRTRGRVR GSNDAAVQKP LNFDDVDGDD DCNLGDLPEI RPLGRKVRNG GASAKKGSTP 300 RNQRNKKMDD DTGGSDGKGA RNFWFVXDSI TLVRAKRDQD LYFAGMGPRE WKWEDVRSTL 360 QKMDVTRKVV DCRKKWDNLM QQFKKVHKFQ HLSGGKDYFK LASSARRSEG FNFVMVRSVY 420 EEMEAMTKGD HTIHPKNLAD TGAPGGVQML AGTGAGGESM GSEGGGESID EEQGSTKDST 480 FNAGSADGSG KTKNMRQQTF EAVVEVMDKH GVLMASTMDS SSKRQSSTML RQCEILESEV 540 EVLRKHYVAA DEANKMMCNA LMEIAKAIRA R

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MWSCCPFQGP YIGDLLHRLP LVLLAVVLLL IVVFFHVCFV GLLPVAARKR RSSKNDDRMD  60
RRLTNDRLAG TTVATSNRQC TTGSVAKQAY DPTLYAHLPS HEIPQLPSDD EGEDIRSSIV  120
SLGSGSTQDW AATQSYGGRR AETPWSYTSL LNEGLCDDDG NAAVDLNFQL SSSSGAAATH  180
TRIINPHPDG DRADLNRFAR AAGIEMCPRG MAEEESVRIN VRNGCAYHLR RETDPRLRVD  240
GSDRTRGRVR GSNDAAVQKP LNFDDVDGDD DCNLGDLPEI RPLGRKVRNG GASAKKGSTP  300
RNQRNKKMDD DTGGSDGKGA RNFWFVXDSI TLVRAKRDQD LYFAGMGPRE WKWEDVRSTL  360
QKMDVTRKVV DCRKKWDNLM QQFKKVHKFQ HLSGGKDYFK LASSARRSEG FNFVMVRSVY  420
EEMEAMTKGD HTIHPKNLAD TGAPGGVQML AGTGAGGESM GSEGGGESID EEQGSTKDST  480
FNAGSADGSG KTKNMRQQTF EAVVEVMDKH GVLMASTMDS SSKRQSSTML RQCEILESEV  540
EVLRKHYVAA DEANKMMCNA LMEIAKAIRA R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	2e-06	Trihelix family protein