PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG61926.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 508aa    MW: 55299.1 Da    PI: 6.7014
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG61926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.51.9e-09252329272
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                 W  +  l+L++ +r+ +e+l ++       k k+ +W +v+++m + g++r   qC + wen+   ykk++ +e++++
  GBG61926.1 252 WNLDDSLTLVRCKRDQDEALAAAghnfarmKNKEWKWTDVANHMGALGVKRDWDQCMKWWENIFSWYKKVQLREESGK 329
                 888888999999998888777542333333799*************************************99999873 PP
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MGGGCDQRSS GMPRFDPALY AHLPSWQKPL PDGESWEPPS SAVPLAYGST QSISDCRMQR  60
PDLRQRQGPM TSLLMHGQQQ GMGPPLKLQL SSGGQATVSR TLLVNPSGLS QGEPSIGCEG  120
RRSITVRVQQ PAFPVNYGGV GGPLPRVPGG GRGTAATTGG QAESREANVV EHIIAHVSTM  180
RATSDGDGGG EGGVDDDMCE DVDEVEEEEE EEEEMEDEVL PPSSGHKKTP AKKATLKGRG  240
KGKAGSGGRT IWNLDDSLTL VRCKRDQDEA LAAAGHNFAR MKNKEWKWTD VANHMGALGV  300
KRDWDQCMKW WENIFSWYKK VQLREESGKQ SFFTLTPKQR NEEGYKFQMD RRLFEAIDVG  360
QHGNQTIHPP NLVDTGLSQL QGGRNGGGGE TSASENGETG GGGGIRKQII RSGCRRTCLQ  420
LAVHLGFAHR LLRDVVIFVT KIGSAVPNRW TGGVDVTGDM VRMLVSVLAK EFEERLHCPS  480
TFRVVVDAPL EPRDDLHGNV RILRGDVF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1382389GGRNGGGG