PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG62185.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 959aa MW: 104636 Da PI: 6.7738

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG62185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.5	6.2e-12	130	206	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r+ +++l r k k +We+v k++ + g+ +r+++ C++kw+nl +++k + + +++ GBG62185.1 130 WTVEHMIALIRAKRDQDSHLAglghnygRMKTKTWKWEDVEKRLVQMGVtSRKAVDCRKKWDNLYQQFKSVHKFMGE 206 ************77777664444333779*********99999899***************99876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 959 aa Download sequence
MPGGAIDGEG DDDERDATEV VGRQFWDDER QRLRSTNTAS ITRGVARISV GAEEEFQDCA 60 GGGGEEIAAD DGGDDNDEDD DGEMEIRPVG RKRGGSTART KVRESHTGRK GKKCGEESSA 120 GDETKSRDFW TVEHMIALIR AKRDQDSHLA GLGHNYGRMK TKTWKWEDVE KRLVQMGVTS 180 RKAVDCRKKW DNLYQQFKSV HKFMGESGKP NFFTLTPGER RERGFNFRMD ERAYSEMKAM 240 SGGDHTIHPT NLADTGAPGG VQLPGTVGGR NDSSGSDVGG GGQDDNRGST RDSSFSGGGG 300 GGAGKRKNVR QQTFEAMADV MKEHGALMST TVDSVSKRQC SILTRQCDIL EREIQVQKDH 360 YEKVDEANFL MCNALMEIAK AIRERARRGL TRHVEPAKRR IVNVVRRQGA RHQPPAAPSS 420 SSSTWSVVHV SQAPQLSAFG THFFVDDMAP RDASGKAKRN SGSGDGGETQ KGRGHIPKSK 480 RPRFDDDSSE HSGDLHGEEE SMVNAQGLDV VKRLGFGRDG VSREQLAAVK QGLLGGVAVS 540 LARTPRSAGI VMTDARAARQ VSPKVVHVAP RLPIPAQQAG TSGVEKTPSA QKVDTMTGGG 600 RTAAAENTTA SGDARRGGDD DDDRPVSAMV KKGVKEDDLE ERSKLWIDCD AFWGQGPGKP 660 LREAVGDCTD YFVAIANGDA GAEPPSMLVM PPNDVPRFKI DDPAQRDPAL RRAHNVEKVV 720 LRAIHGWIFK SSSRSTGFAR AESYVTVDFA TDVAGAIWQA LEWSRVVSPA LVYHTLAMKM 780 DVPLWFAGVK IVDRPEDDDM AARQEATILR LADYWTDAFW CGQWADGSRV KQDRLTRLAD 840 CLRVLLSACM WIMRMGGDDD RSHYEASFYA SMLAKLALIA AGSYIFNWRR HIVDSANLVL 900 DRLGKAHLTL GDYPHCIPEW ADCGLVFGHN AALKNAAEAA KHGWIGSGPL ADDDGDDKN

Sequence ? help Back to Top

Protein Sequence Length: 959 aa Download sequence

MPGGAIDGEG DDDERDATEV VGRQFWDDER QRLRSTNTAS ITRGVARISV GAEEEFQDCA  60
GGGGEEIAAD DGGDDNDEDD DGEMEIRPVG RKRGGSTART KVRESHTGRK GKKCGEESSA  120
GDETKSRDFW TVEHMIALIR AKRDQDSHLA GLGHNYGRMK TKTWKWEDVE KRLVQMGVTS  180
RKAVDCRKKW DNLYQQFKSV HKFMGESGKP NFFTLTPGER RERGFNFRMD ERAYSEMKAM  240
SGGDHTIHPT NLADTGAPGG VQLPGTVGGR NDSSGSDVGG GGQDDNRGST RDSSFSGGGG  300
GGAGKRKNVR QQTFEAMADV MKEHGALMST TVDSVSKRQC SILTRQCDIL EREIQVQKDH  360
YEKVDEANFL MCNALMEIAK AIRERARRGL TRHVEPAKRR IVNVVRRQGA RHQPPAAPSS  420
SSSTWSVVHV SQAPQLSAFG THFFVDDMAP RDASGKAKRN SGSGDGGETQ KGRGHIPKSK  480
RPRFDDDSSE HSGDLHGEEE SMVNAQGLDV VKRLGFGRDG VSREQLAAVK QGLLGGVAVS  540
LARTPRSAGI VMTDARAARQ VSPKVVHVAP RLPIPAQQAG TSGVEKTPSA QKVDTMTGGG  600
RTAAAENTTA SGDARRGGDD DDDRPVSAMV KKGVKEDDLE ERSKLWIDCD AFWGQGPGKP  660
LREAVGDCTD YFVAIANGDA GAEPPSMLVM PPNDVPRFKI DDPAQRDPAL RRAHNVEKVV  720
LRAIHGWIFK SSSRSTGFAR AESYVTVDFA TDVAGAIWQA LEWSRVVSPA LVYHTLAMKM  780
DVPLWFAGVK IVDRPEDDDM AARQEATILR LADYWTDAFW CGQWADGSRV KQDRLTRLAD  840
CLRVLLSACM WIMRMGGDDD RSHYEASFYA SMLAKLALIA AGSYIFNWRR HIVDSANLVL  900
DRLGKAHLTL GDYPHCIPEW ADCGLVFGHN AALKNAAEAA KHGWIGSGPL ADDDGDDKN