PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG62262.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 333aa    MW: 35919.4 Da    PI: 7.3288
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG62262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.31.4e-11147222270
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ + + aLi+a+ + + +l+         k ++ +W +v+ ++++ g+ +++ +C +kw+nl +++kk+ + ++ 
  GBG62262.1 147 WSVDDIIALIRAKCDQDAHLQGMghayawmKPREWKWLDVATRLKKVGVDKEADRCGKKWDNLMQQFKKVHHFQGL 222
                 999***********999999963233334479999**********************************9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MQSLFPLSAG SSAGRRVGEC RETAPVVADV GDARDGREVW AEQRRLMRSV REESITRGVQ  60
RLRVGEDGHD GEEAGVDAHD PDWNDNGAEG WEDDAGNISS SKQAAAMGGR GGKTKSCGGN  120
GRRGKRTAGK GSDAEGDVDG EGGRHFWSVD DIIALIRAKC DQDAHLQGMG HAYAWMKPRE  180
WKWLDVATRL KKVGVDKEAD RCGKKWDNLM QQFKKVHHFQ GLSRKQGFFQ LSGKDRMSKG  240
FSFNMDRAVY DEILGSTAKN HTINPKNVAD TGAQGGVRLP SASNADPESV GNGDGGAEHD  300
DDDDGSTKGS SQTTVAQAVS ARGRAQGSKH LRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-07Trihelix family protein