PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG62410.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family LBD
Protein Properties Length: 178aa    MW: 19050.5 Da    PI: 6.6156
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG62410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260145.51.6e-4581071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrrkC+++C +apyfp +qp+kfanvhk+FGasn++kll++lp ++reda++sl+yeA+ar++dPvyG+vg i+ lqqq+++l+aela +++
  GBG62410.1   8 PCAACKFLRRKCTSECLFAPYFPPDQPQKFANVHKIFGASNITKLLHDLPVHQREDAVNSLAYEADARVKDPVYGCVGAISVLQQQVAHLQAELAIAHA 106
                 7**********************************************************************************************9998 PP

      DUF260 100 e 100
                 e
  GBG62410.1 107 E 107
                 7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MGSSAISPCA ACKFLRRKCT SECLFAPYFP PDQPQKFANV HKIFGASNIT KLLHDLPVHQ  60
REDAVNSLAY EADARVKDPV YGCVGAISVL QQQVAHLQAE LAIAHAEIQR LHNAAANSGS  120
IPVSSKDLLE LGAGGAGGSY DTAFTVSDDA LRQQLSEQMS SQMHNITQQM GSQLAAQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.17e-59LBD family protein