PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG62497.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 830aa MW: 90901.7 Da PI: 5.7398

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG62497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.7	3.3e-09	54	129	2	70
trihelix 2 WtkqevlaLiearremeerlrr.g......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + l L++ +re + +l g + ++ +W++++k+m+ g +++ C kw+nl + ykki++ ++k GBG62497.1 54 WSTDDQLRLVRCKREQDMHLAGlGhyygwmRTEEWKWDDIAKRMANMGTSKEVDDCSRKWDNLFQNYKKIQRFQGK 129 8888888999999988888775322222336999************************************998877 PP

Sequence ? help Back to Top
Protein Sequence Length: 830 aa Download sequence
MEPVDDDDDV EIRPLGKTTG RGKGRLRGGG CGRSGGRGGR GGASDDGGKS VTYWSTDDQL 60 RLVRCKREQD MHLAGLGHYY GWMRTEEWKW DDIAKRMANM GTSKEVDDCS RKWDNLFQNY 120 KKIQRFQGKS GEADFFRLAN KEREEDNFKF RMERVLYNEI HASMLVNHTI FPPNIADTGS 180 LEVVQLPRRG VGGGESVGSE AGGDGSADDR SSARDSGQNA GSGAGGGKRK NARQQTFEAI 240 TEVMDRHGQL MASTIDSLSK RQCSILTRQC DILEQEVAVQ RAHYAASDET YKMMCHAHME 300 IVAAIRGRKA MSPRGGGGSR ARGKKLDAPH DDVGGADRGV RHVMKAKKDR RDGASFSGPR 360 TDGDGWGRPN ETDDNDVFSM GAPDDQPPPL PSNIHAIAGG SSAQVTTRDE RIINVEVNED 420 TRLDEGQGGV VPERSAIYPL TLSTTPRQQR ALVATGGAVP KQAVPLPATP RQHRAGDNVG 480 SGVAATTATA VEPLQPRHAG ADVGVVAGAP WGAMGEGRRG EDVASATEVA RAEKKRGGED 540 DEPLVNRVRK GGLAKDLAER ARLWVDDKSF WTSREGRILY NIINETREHL VTIASGLPLP 600 NVLRSVAMPR SNIAQIRVTD AGQLQGALSR ASKVQSLALR VLHGWVFKSG SRERGYNVAF 660 QYVVESVATD IAHSLWHGEK WSNAVSPAVC AHTLDMGMDL PLWFVGVHIE DRPANDEMAA 720 YQEATVMQLI AAFSTAVETA QNVDGGHVAH KRLSCLAESF KELLAACMWI IELHHYDDHD 780 DDDDDYDDYD DDDNDDDDDH GDNDDDDHHD DELAMWEKLR KALHGARHWL

Sequence ? help Back to Top

Protein Sequence Length: 830 aa Download sequence

MEPVDDDDDV EIRPLGKTTG RGKGRLRGGG CGRSGGRGGR GGASDDGGKS VTYWSTDDQL  60
RLVRCKREQD MHLAGLGHYY GWMRTEEWKW DDIAKRMANM GTSKEVDDCS RKWDNLFQNY  120
KKIQRFQGKS GEADFFRLAN KEREEDNFKF RMERVLYNEI HASMLVNHTI FPPNIADTGS  180
LEVVQLPRRG VGGGESVGSE AGGDGSADDR SSARDSGQNA GSGAGGGKRK NARQQTFEAI  240
TEVMDRHGQL MASTIDSLSK RQCSILTRQC DILEQEVAVQ RAHYAASDET YKMMCHAHME  300
IVAAIRGRKA MSPRGGGGSR ARGKKLDAPH DDVGGADRGV RHVMKAKKDR RDGASFSGPR  360
TDGDGWGRPN ETDDNDVFSM GAPDDQPPPL PSNIHAIAGG SSAQVTTRDE RIINVEVNED  420
TRLDEGQGGV VPERSAIYPL TLSTTPRQQR ALVATGGAVP KQAVPLPATP RQHRAGDNVG  480
SGVAATTATA VEPLQPRHAG ADVGVVAGAP WGAMGEGRRG EDVASATEVA RAEKKRGGED  540
DEPLVNRVRK GGLAKDLAER ARLWVDDKSF WTSREGRILY NIINETREHL VTIASGLPLP  600
NVLRSVAMPR SNIAQIRVTD AGQLQGALSR ASKVQSLALR VLHGWVFKSG SRERGYNVAF  660
QYVVESVATD IAHSLWHGEK WSNAVSPAVC AHTLDMGMDL PLWFVGVHIE DRPANDEMAA  720
YQEATVMQLI AAFSTAVETA QNVDGGHVAH KRLSCLAESF KELLAACMWI IELHHYDDHD  780
DDDDDYDDYD DDDNDDDDDH GDNDDDDHHD DELAMWEKLR KALHGARHWL