PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG62678.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 352aa    MW: 38415.7 Da    PI: 6.5856
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG62678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.46.6e-12100175169
    trihelix   1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 rW + e+laLi+a            e+++++++  ++We +s ++   gf r+   C+++w+nl k y+k+  +++
  GBG62678.1 100 RWNDAETLALIRAHGeyrvaraVNSEAIGNACSLNKKWEGISTAVCVAGFIRNGYDCENRWKNLWKWYRKVLVHDG 175
                 8************9966666556666666789**************************************866555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MVLSDQELGV DSVDWARDCG NGLPHQMGGG DDDYADSQAG ADSQAGGDRG HHETEGSVQA  60
RGTPGEEQPW VGEEQHLPPP TASDGAVPGN GGDGCHRNRR WNDAETLALI RAHGEYRVAR  120
AVNSEAIGNA CSLNKKWEGI STAVCVAGFI RNGYDCENRW KNLWKWYRKV LVHDGMSGVQ  180
SYWTMSPEAR AHAGLTFHLR RSWFDLIDSF NIRNPVVHPE GVVDPGNEED GRGPGQGSRG  240
SPPVSSGRAE SGVANACAEG AEVRTSAKRR RTVANARERP VKDISVVMRE QTDALREHSR  300
RSVECAELTV KVMYKQAAVQ QQIGKLTAKV AREDMAIRKE IGLLMVEKLE KG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.13e-07Trihelix family protein