PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63159.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1058aa MW: 114231 Da PI: 7.4827

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27	1.1e-08	530	617	2	82
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 Wt ++ aL++a+r ++++++r k k +W+++ +++ + g+ ++++ C +kw+nl +++k + + +r s++ + +yf GBG63159.1 530 WTVEHMIALVRAKRdqdlhlaGLGHNMGRMKTKTWKWADIESRLVQIGVtTKKADDCGKKWDNLYMQFKIVHKLPARR-SGDGGRARYF 617 9***********77777777778888999*************9678***************999988887.4444455565 PP

Sequence ? help Back to Top
Protein Sequence Length: 1058 aa Download sequence
MAGHGDNHDF GGSSRNQGGG GWDYGGHREY GGGHRGYASD RGDSGDRGYD GDRRSGGERI 60 FDRGLWPGPP ICFNCDEPGH YANQCSHPRW NSHPSTSASR GGSSPPNRPN FSRCQLLDPL 120 ESKVAEIGSR AGREVWASQR RKAERKEAEE RAEAERVAAV LNKKKKEEKS CKEVDIKEEL 180 HKSLDARMVV RVGKLHEDVD SAVPAEESSA SSNKTEELNL QTRRLCIIEK RKRGPEAVFK 240 GSSPMELPPK RTPKRGSRPV GFSGRPVHLR RLLRATIGIV GRLRFEKRVL SDLKNLDALV 300 LQNICKDEGI PYNVGYDGGL VDLSFGLRSG SGQDVTHTVL VNPGSSSNHT APSVGPCGLP 360 DTRGRGCGQS GDERGLVSRG RTTVGTAGVR AEGTRTGGST TAGGAVHRGG DDADGYAAEV 420 AGREVWDDYR RQSRQSSTSA ITRGVAKINV RADDTPGDCD GAGGEDLSAG DGGNDNDDDD 480 DGEMEIRPLG KKRGGPRATS KSSEPRAGRR GKKTAGDALA GDGAKSRDFW TVEHMIALVR 540 AKRDQDLHLA GLGHNMGRMK TKTWKWADIE SRLVQIGVTT KKADDCGKKW DNLYMQFKIV 600 HKLPARRSGD GGRARYFSGA AIGFRARWVD EGTGVRCEAE HCCWCCRGVA KDLEGGSGCH 660 NGGARPEATS RGDGEGPATS ATSTATVGGF GGGKAQPAQK GDATAIGTRT AAADRSGRTR 720 VAEGAGEERV DDVRNDVRHD EGRRDGKREG DDDDDRPLVT RLKGDAKEDG LEERSKLWVD 780 CDSFWGQGPG KPLREAVGEC ADYFIAIANG DAGAEPPAML ILPPNDIFKS SSQSAGFARP 840 ESYITVDIAT NVARAVWKGQ EWSNVVSPAL VYHTLAMKMD VPLWFAGVKI VDRPEDDDMA 900 VRQEATVLRI AECWTDAMWC GQWADDGRVK QERLSRLADC LRALLSACMW IMRMGGDDDR 960 SHYEACLCSS LVAKPTMIAA ASYIFNWRRH IVDSANLVLD RIGKAHLTLG EYPHCIPKWC 1020 DCGLVFGHNA ALKNVAEAAK HGWIGSGPAA EEVGDEDG

Sequence ? help Back to Top

Protein Sequence Length: 1058 aa Download sequence

MAGHGDNHDF GGSSRNQGGG GWDYGGHREY GGGHRGYASD RGDSGDRGYD GDRRSGGERI  60
FDRGLWPGPP ICFNCDEPGH YANQCSHPRW NSHPSTSASR GGSSPPNRPN FSRCQLLDPL  120
ESKVAEIGSR AGREVWASQR RKAERKEAEE RAEAERVAAV LNKKKKEEKS CKEVDIKEEL  180
HKSLDARMVV RVGKLHEDVD SAVPAEESSA SSNKTEELNL QTRRLCIIEK RKRGPEAVFK  240
GSSPMELPPK RTPKRGSRPV GFSGRPVHLR RLLRATIGIV GRLRFEKRVL SDLKNLDALV  300
LQNICKDEGI PYNVGYDGGL VDLSFGLRSG SGQDVTHTVL VNPGSSSNHT APSVGPCGLP  360
DTRGRGCGQS GDERGLVSRG RTTVGTAGVR AEGTRTGGST TAGGAVHRGG DDADGYAAEV  420
AGREVWDDYR RQSRQSSTSA ITRGVAKINV RADDTPGDCD GAGGEDLSAG DGGNDNDDDD  480
DGEMEIRPLG KKRGGPRATS KSSEPRAGRR GKKTAGDALA GDGAKSRDFW TVEHMIALVR  540
AKRDQDLHLA GLGHNMGRMK TKTWKWADIE SRLVQIGVTT KKADDCGKKW DNLYMQFKIV  600
HKLPARRSGD GGRARYFSGA AIGFRARWVD EGTGVRCEAE HCCWCCRGVA KDLEGGSGCH  660
NGGARPEATS RGDGEGPATS ATSTATVGGF GGGKAQPAQK GDATAIGTRT AAADRSGRTR  720
VAEGAGEERV DDVRNDVRHD EGRRDGKREG DDDDDRPLVT RLKGDAKEDG LEERSKLWVD  780
CDSFWGQGPG KPLREAVGEC ADYFIAIANG DAGAEPPAML ILPPNDIFKS SSQSAGFARP  840
ESYITVDIAT NVARAVWKGQ EWSNVVSPAL VYHTLAMKMD VPLWFAGVKI VDRPEDDDMA  900
VRQEATVLRI AECWTDAMWC GQWADDGRVK QERLSRLADC LRALLSACMW IMRMGGDDDR  960
SHYEACLCSS LVAKPTMIAA ASYIFNWRRH IVDSANLVLD RIGKAHLTLG EYPHCIPKWC  1020
DCGLVFGHNA ALKNVAEAAK HGWIGSGPAA EEVGDEDG