PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG63169.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 296aa    MW: 32946 Da    PI: 8.2263
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG63169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.72.2e-1141116270
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ ++  aLi+a+r+ + +l+ +       k ++ +W++v +++ + g+ r +++C +kw++l +++kk+   +++
  GBG63169.1  41 WSVEHMVALIRAKRDQDAQLQMAghafawmKGREWKWADVCERLLKIGVDRPANKCGKKWDKLMQQFKKVHCFQGE 116
                 99*******************753444444699************************************9766555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGSRAGNSRA SASTARHGKK AVGGGGEAEG DEEGEGGQNF WSVEHMVALI RAKRDQDAQL  60
QMAGHAFAWM KGREWKWADV CERLLKIGVD RPANKCGKKW DKLMQQFKKV HCFQGESRKE  120
DFFQLSTKER LPRGFNFNMD RNVYEEIKGS TARSHTIHLQ NVADIGRAGG VQLPSGSSGS  180
PKFVGDGDTV GDGNDEEDSS TRGCSQTTKS PGSARKRKNM RQQTFEALTE CMEKHGMLMA  240
STMESASERQ CSIQVRQCEA MEAELEVQKK HYVASDEVSK MMCHTLMEIA KDIRDR