PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63495.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 661aa MW: 73430.6 Da PI: 9.263

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63495.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.3	1.9e-08	293	368	2	70
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + aL++ +re +e+l ++ k k+ +W +++k+m+ g++r+ C ++wen+ ykk++ +ek+ GBG63495.1 293 WSLDDSIALVRCKREQDETLAAAghnfarmKTKQWKWTDIGKRMEVLGVNREWDVCMKRWENIFSWYKKVQWREKE 368 88888999999999888888864333333379999**********************************9988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MVDHSRKLSL LCVLVLLLLL LLILHLWSSR RARVVPCKWK LTRSSKHPAC KGGMGAGDDE 60 ADMFMYGGMG GGGECSFPSD TPCYDPALYA HLPPHLQPLP DDDNWQPPPS TFDLAHGSTQ 120 SISDSGVWVR DQRPRQGPMT SLLFDGLQQG MCPLLDLQLS SGGRPAASRT LIINPASRSE 180 GDASVGQSAR RPGGASLQTT AALANTNIHA VPTVTRPSAR VRASSEGREA HVVDDIIAKE 240 TTWRTKTTKS MMEPWPKTKS QKKTSARKPA PKGRAKGKAK DGDGESGGGR IIWSLDDSIA 300 LVRCKREQDE TLAAAGHNFA RMKTKQWKWT DIGKRMEVLG VNREWDVCMK RWENIFSWYK 360 KVQWREKESG LQSFFTLTPK ERADKGYKFQ MDRRLYEAIH AGQHGNQTIH PPNVVDTRAS 420 EKLGANNGGM GETSASDNGD GEAGKGCASR SSSGMKFTKR KNARQQAFEA VTDVMSTHSI 480 VVADSVDRAS KRQCDVLQRQ CDIMEREVKV EETQCGVMDA GQRMLCDALL KIAEALSRPR 540 GNSHGREMEF DHHVNHEDFR YYKVDANAVT CLAVVVGFGF GRRALREVIM HITRVGTAVP 600 TRFVGGVDVL AEMVRMMITN FAMEFRDRLH RPATYTVVLH EPFEQREDLH GDIDILRKGM 660 F

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MVDHSRKLSL LCVLVLLLLL LLILHLWSSR RARVVPCKWK LTRSSKHPAC KGGMGAGDDE  60
ADMFMYGGMG GGGECSFPSD TPCYDPALYA HLPPHLQPLP DDDNWQPPPS TFDLAHGSTQ  120
SISDSGVWVR DQRPRQGPMT SLLFDGLQQG MCPLLDLQLS SGGRPAASRT LIINPASRSE  180
GDASVGQSAR RPGGASLQTT AALANTNIHA VPTVTRPSAR VRASSEGREA HVVDDIIAKE  240
TTWRTKTTKS MMEPWPKTKS QKKTSARKPA PKGRAKGKAK DGDGESGGGR IIWSLDDSIA  300
LVRCKREQDE TLAAAGHNFA RMKTKQWKWT DIGKRMEVLG VNREWDVCMK RWENIFSWYK  360
KVQWREKESG LQSFFTLTPK ERADKGYKFQ MDRRLYEAIH AGQHGNQTIH PPNVVDTRAS  420
EKLGANNGGM GETSASDNGD GEAGKGCASR SSSGMKFTKR KNARQQAFEA VTDVMSTHSI  480
VVADSVDRAS KRQCDVLQRQ CDIMEREVKV EETQCGVMDA GQRMLCDALL KIAEALSRPR  540
GNSHGREMEF DHHVNHEDFR YYKVDANAVT CLAVVVGFGF GRRALREVIM HITRVGTAVP  600
TRFVGGVDVL AEMVRMMITN FAMEFRDRLH RPATYTVVLH EPFEQREDLH GDIDILRKGM  660
F