PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63605.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 424aa MW: 46884.8 Da PI: 9.4224

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.1	3.4e-11	182	268	4	85
trihelix 4 kqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwe.nlnkrykkikegekkrtsessstcpyfdql 85 ++e+++Li+ r e++ + ++++ lk+ lW +v k mre + rs ++Ck++w ln+ y+++k+++k +++++ +q+ GBG63605.1 182 EEETMKLIRCRYEVKATHGDDSeawglakLKQRLWPDVEKLMREANYDRSDEECKNRWHfVLNNLYRAVKDHDKWS---VKQKYFTMNQM 268 79********99999998634444444*************************9468********9974...23334444555 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MTDLLTLSTG DGTGRELTQG SPAFGSMEQT GSGVSGAGHE STRSQNTGSE GRPSVLVQLI 60 RDVDFGDIEA VEGGLPAEHV TAVTAGGTVQ AGARSHDHEL QAPPCSPTTG GDAAVAAEVQ 120 APECSPQTMG ESGGTSALAP LARGGGVRSG HEPGRAQPGR GQPARGRAGR ARGGHPRPQF 180 GEEETMKLIR CRYEVKATHG DDSEAWGLAK LKQRLWPDVE KLMREANYDR SDEECKNRWH 240 FVLNNLYRAV KDHDKWSVKQ KYFTMNQMER KRWGLDFLMR REWYNFIDQH EKDKDTINMD 300 DITDPGAETE NVGVARWAMA EQTKVPGQEK AVTIVRVQER RHSRRTMGRT LQVLQMVQGP 360 LQSRVTWPRS VEGVVLMQGK WPWVLFAEQC ATTPLRRLGK IRSTMRSCVK SAKSRLPHKK 420 ESPK

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MTDLLTLSTG DGTGRELTQG SPAFGSMEQT GSGVSGAGHE STRSQNTGSE GRPSVLVQLI  60
RDVDFGDIEA VEGGLPAEHV TAVTAGGTVQ AGARSHDHEL QAPPCSPTTG GDAAVAAEVQ  120
APECSPQTMG ESGGTSALAP LARGGGVRSG HEPGRAQPGR GQPARGRAGR ARGGHPRPQF  180
GEEETMKLIR CRYEVKATHG DDSEAWGLAK LKQRLWPDVE KLMREANYDR SDEECKNRWH  240
FVLNNLYRAV KDHDKWSVKQ KYFTMNQMER KRWGLDFLMR REWYNFIDQH EKDKDTINMD  300
DITDPGAETE NVGVARWAMA EQTKVPGQEK AVTIVRVQER RHSRRTMGRT LQVLQMVQGP  360
LQSRVTWPRS VEGVVLMQGK WPWVLFAEQC ATTPLRRLGK IRSTMRSCVK SAKSRLPHKK  420
ESPK