PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG63749.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 228aa    MW: 25720.6 Da    PI: 11.0446
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG63749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.78.5e-1041119273
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 
                 W+ +++ aLi+a+ + + +++       r k+++ +W +v +++++  +   + +C +kw+nl +++kk+ + ++  ++
  GBG63749.1  41 WSVDHIVALIRAKCDQDAHMQgighayaRMKRQEWKWLDVVQRLKKVSVDSDADKCGKKWDNLIQQFKKVHHFNGLSEK 119
                 9*************9999999655544456788999999999*****************************99998433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MRGSGEKTKA SACNGHRCKK VVGKGSDAEG DGDAEGGRHF WSVDHIVALI RAKCDQDAHM  60
QGIGHAYARM KRQEWKWLDV VQRLKKVSVD SDADKCGKKW DNLIQQFKKV HHFNGLSEKQ  120
DFFQLSAKER TSEGFNLNMD QCGLRRDSGV HDRRTIPYTQ RTSPTPVLRV VCACRPPLLR  180
IPNLWAMGTL VQGRTTTMTG RRKVLLKRRV AQAVSGRGRA RGSKLLKR