PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG64301.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 262aa    MW: 29201 Da    PI: 9.1725
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG64301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.45e-10371970
    trihelix  9 aLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                aLi+++r+ + +l+++         ++ +W +v +++ + g+ r + +C +kw+nl + +kk+ + ++ 
  GBG64301.1  3 ALIRVKRDQDAQLQASGhnfarmrTREWKWMDVRERLLKVGVDRPADKCGKKWDNLMQHFKKVHAFMGM 71
                89*****9999999763334444499************************************9887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MVALIRVKRD QDAQLQASGH NFARMRTREW KWMDVRERLL KVGVDRPADK CGKKWDNLMQ  60
HFKKVHAFMG MSRKKDFFQL TSQRRAEKGF DFNMDRTVFE EIKGARKRSH TISPTNVADT  120
GGAGGVQLPS AQSATPESVG DGEAAGDGND EDESSARGGS QTSGGPAGFG KRKNVRQQTF  180
EALSECMDKR GALMASMMES ASTRQCETME STSKRQCSIQ IRQCEAIEAE VEIQKQHCSA  240
STEVSRLMCQ ALLEIAKAIR ER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-06Trihelix family protein