PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG64306.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 269aa    MW: 29811.3 Da    PI: 9.4375
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG64306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.71.1e-1171144268
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                 W+ +  l+L++ +r       e++++++r + k+ +W++++k+m++ g  r +  C +kw+nl + ykki++ +
  GBG64306.1  71 WSTDDQLLLVRCKReqdmhlaELGHNYGRMRTKEWKWDDIAKRMAKAGRPRDADDCMKKWDNLFQNYKKIQRFQ 144
                 9999999999999955555555566666778**************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MTTSVAVTMS TKGSGRTRMH GTSTMTFIFG LWGRRPGEGK DAAKVLFVVD PFGRGGRGGV  60
SDDGGKSATY WSTDDQLLLV RCKREQDMHL AELGHNYGRM RTKEWKWDDI AKRMAKAGRP  120
RDADDCMKKW DNLFQNYKKI QRFQNVSDRA DFFRLSNEER KENNFKFRMD RVLYNEIHGG  180
MLGNHIIFPP NVVDAGIPDA VQLPRRGADG GESAGSEGGG DGCPEERSSA RDSDNNADSG  240
GAGGKRKNAR QQALESIAGV MDRHGELMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-08Trihelix family protein