PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG64812.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 809aa MW: 88867.7 Da PI: 6.2011

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG64812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33	1.6e-10	207	283	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r+ +++l r k k +W++v k++ + g+ +r+++ C +kw+nl +++k + + +++ GBG64812.1 207 WTMEHMIALIRAKRDQDSHLAglahttgRMKTKTWKWDDVEKRLVHMGVtSRKAVDCGKKWDNLYQQFKTVHKFMGE 283 ************888888855554335689999*****99999799***************99876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MGSQLHRQAS TPTYTDLLEG RTPAGYDPGV LDLNFGLRSG SAEEVTRTVV VNPASGTTHT 60 PAPVTTRTGG SVPCRTTTAG GTVDGRRPNE EWSATEVVGR KFWDDHRRQS REASTXXIXR 120 GVAKITVGAD DILGDEDGAV AEDCEADDGA GNDDEEDDEE MEIRPVGRKR GGSRAAKKLP 180 ETRTGRRGKK GVEDASAGEG SKSRDFWTME HMIALIRAKR DQDSHLAGLA HTTGRMKTKT 240 WKWDDVEKRL VHMGVTSRKA VDCGKKWDNL YQQFKTVHKF MGESGKPNFF TLTPGERKER 300 GFDFRMDERV YSEMAAMTRS DHTIHPTNLA DTGATGGVQM SGPRGGRNES GGSEGGGDGQ 360 DDDQGSTRDS ISGGGVGGGS KWKNVRQQTF DTIAHVMKEH GSLMATTVDS ASKRQCSILT 420 RQCDILEREV EVLKEHYVKA DQANLMMCEA LMEIAKAIRE RSNGKREGND GGDRPLLPRG 480 KGAPKEDELE EKAKLWFDCD AFWGQGPGKP LREAVGECTN YFVAIANGDA GAEPPSMLIM 540 PPNDVPRFKI DDPAQRDPAL RRARSVERVV LRTIHGWIFK SQSRSTGFSR AESYITVDFA 600 TDLARAVWQA LEWSRVVSPA LVYHTLAMKM DVPLWFAGVK IEDRPEDDDM AAWQEATVVL 660 LAECWTDALW CGQWADGGRV KQERLSRLAG SLRALLCAVM WIMRMGGDDD RSHYEAWSYA 720 SMVAKPTMIA AGSYIFNWRR HVVDSANLVL NRLGKAHLTL GDYPQCIPEW CDCGLAFGHN 780 AALKNVAEAA KHGWIGSGPA ADDDGDDGK

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MGSQLHRQAS TPTYTDLLEG RTPAGYDPGV LDLNFGLRSG SAEEVTRTVV VNPASGTTHT  60
PAPVTTRTGG SVPCRTTTAG GTVDGRRPNE EWSATEVVGR KFWDDHRRQS REASTXXIXR  120
GVAKITVGAD DILGDEDGAV AEDCEADDGA GNDDEEDDEE MEIRPVGRKR GGSRAAKKLP  180
ETRTGRRGKK GVEDASAGEG SKSRDFWTME HMIALIRAKR DQDSHLAGLA HTTGRMKTKT  240
WKWDDVEKRL VHMGVTSRKA VDCGKKWDNL YQQFKTVHKF MGESGKPNFF TLTPGERKER  300
GFDFRMDERV YSEMAAMTRS DHTIHPTNLA DTGATGGVQM SGPRGGRNES GGSEGGGDGQ  360
DDDQGSTRDS ISGGGVGGGS KWKNVRQQTF DTIAHVMKEH GSLMATTVDS ASKRQCSILT  420
RQCDILEREV EVLKEHYVKA DQANLMMCEA LMEIAKAIRE RSNGKREGND GGDRPLLPRG  480
KGAPKEDELE EKAKLWFDCD AFWGQGPGKP LREAVGECTN YFVAIANGDA GAEPPSMLIM  540
PPNDVPRFKI DDPAQRDPAL RRARSVERVV LRTIHGWIFK SQSRSTGFSR AESYITVDFA  600
TDLARAVWQA LEWSRVVSPA LVYHTLAMKM DVPLWFAGVK IEDRPEDDDM AAWQEATVVL  660
LAECWTDALW CGQWADGGRV KQERLSRLAG SLRALLCAVM WIMRMGGDDD RSHYEAWSYA  720
SMVAKPTMIA AGSYIFNWRR HVVDSANLVL NRLGKAHLTL GDYPQCIPEW CDCGLAFGHN  780
AALKNVAEAA KHGWIGSGPA ADDDGDDGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	7e-06	Trihelix family protein