PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG64848.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 508aa    MW: 55492.2 Da    PI: 7.025
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG64848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.43.6e-08233307270
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 Wt +e  +L ++  e++  + +++       ++ + ++++++m+e+g++ + + C++kw +l k+ k+i++   +
  GBG64848.1 233 WTLEERVLLAKISGEDDALMADAEgahqrmTRGRRYDWIADRMKEEGYTCTGENCRKKWAELTKKVKEIRDACDG 307
                 88888888888888888888876555656688999********************************99997665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MGIGDVVGTQ FEGDRYRASP SAQSWHYIDD PPSTPVPQTH GGVHPSNNRP SLAMPMTDVL  60
SDGGRGAYPT TVYEFGTQQG SSGTYGQCAP QPRVRGAPTR TESPRWGCGP EHSVQASQHR  120
LQGLPPLSPP LTRRTTTMGE DNTPGQARVQ QTAISAAGTR KDGGPACGAD MGSEEEQQQP  180
GIAEHIADQL QRPRVVLPTA GEGRSAASPS AASAGEKRKA PKPAPPAKKN TIWTLEERVL  240
LAKISGEDDA LMADAEGAHQ RMTRGRRYDW IADRMKEEGY TCTGENCRKK WAELTKKVKE  300
IRDACDGSDK PTYWEITTEE RKKLGISMTF ERPLWDVMEW FRTKAAFVMS NTMASEEFRP  360
GGCTTVNDAD SEGTGTEASD SAAKTRRTSS GFAAVDLEVA LGFNKRLLSH FLLWVKKTGD  420
AVPDNWADLE VDIVGDIVTC FIDNLAMEHA SRLDMGPFYH TFMVPLLSAA AISMARFGCE  480
IVRRYGVAPR VSAACDRSGR RNRIRWID