PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG65288.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 384aa    MW: 41893.2 Da    PI: 6.0253
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG65288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.31.1e-091782291869
    trihelix  18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 +++++r + k+ +W++++k+m+  g  r    C +kw+nl + ykki++ ++
  GBG65288.1 178 GHNYSRMQTKEWKWDDIAKRMANAGRPRDVDDCMKKWDNLFQNYKKIQRFQN 229
                 567788999*************************************998665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MQACAGVGAG QGGRRPTTAE PPWRYDPSLY RHLESWETPL PPSDEEPETE ELPTLPLASG  60
STQLLSQTVQ AGGSTSNEGG EFTSLLHQGL GDDDDGGVDL RFGLCSGGAR EASRTFIIDT  120
DPSPRGVQHV VRSRSVGCGG RGGASDDGGK SATYRSPEDQ MLLVRCKREQ DMHLVGLGHN  180
YSRMQTKEWK WDDIAKRMAN AGRPRDVDDC MKKWDNLFQN YKKIQRFQNA SGQPDFFRLS  240
NEERKEHNFK LRIERVLYNE IHAGMVGNHT IFPPNVADTG SPDGVQLPRR GAGGGESVGS  300
EAGGEGFPEE RSFARGSDND AGSGAGGGKR KNARQQALES IADVMDRHGE LMSSTIESSS  360
KRQCSIFTRQ CNILEQEVAV QKAH