PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG65289.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 894aa MW: 97428.7 Da PI: 6.7619

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG65289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.5	3.9e-09	178	229	18	69
trihelix 18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 +++++r + k+ +W++++k+m+ g r C +kw+nl + ykki++ ++ GBG65289.1 178 GHNYSRMQTKEWKWDDIAKRMANAGRPRDVDDCMKKWDNLFQNYKKIQRFQN 229 567788999*************************************998665 PP

Sequence ? help Back to Top
Protein Sequence Length: 894 aa Download sequence
MQACAGVGAG QGGRRPTTAE PPWRYDPSLY RHLESWETPL PPSDEEPETE ELPTLPLASG 60 STQLLSQTVQ AGGSTSNEGG EFTSLLHQGL GDDDDGGVDL RFGLCSGGAR EASRTFIIDT 120 DPSPRGVQHV VRSRSVGCGG RGGASDDGGK SATYRSPEDQ MLLVRCKREQ DMHLVGLGHN 180 YSRMQTKEWK WDDIAKRMAN AGRPRDVDDC MKKWDNLFQN YKKIQRFQNA SGQPDFFRLS 240 NEERKEHNFK LRIERVLYNE IHAGMVGNHT IFPPNVADTG SPDGVQLPRR GAGGGESVGS 300 EAGGEGFPEE RSFARGSDND AGSGAGGGKR KNARQQALES IADVMDRHGE LMSSTIESSS 360 KRQCSIFTRQ CNILEQEVAG RGRRHVPKAK RVRSDDASAR VPPRVAQGWA AAAGGDYNED 420 FMTEEEQRRP RLQYGRAVGS ALRINAPPKR MLTPPPEAQQ LRARERRTEK AVVVDLGGDD 480 DEPLEKRRQR TCTTATPPPT VVARAAVDER PVKGRLPATP SQPRQRNPGD DGGSVQRGGG 540 REVVADTREV EGETAGVAGA GASGTVAPVV TAREEAAVVA TTREDARGKK KTDREGGEPG 600 SSRVRRGVMT KDLIDRVVLW VDDKAFWMTG EGRRLYNIVH ETREYFVASA SGLPPPAVPR 660 SVVLPKSSTR VARIADQSQL QQAISRATAV ENIALRILHD PAVCAHTIDL SMDLPPWFVG 720 ANIEDRPDDD NMAAHQESTV ICVAHAFRAA VQMGALIDAD FISHDRICRV ADCFRLLLAA 780 CMWIMRMAGD DPRSHYEAFY FASLVAKPTL VAAMHCSFDH RRSVVRAANV VTERLGKANA 840 TLGEYPDYIP QWAPCGIGFR HDASATGLED AKKLDWLGSG LPDDDNNNNG KDDA

Sequence ? help Back to Top

Protein Sequence Length: 894 aa Download sequence

MQACAGVGAG QGGRRPTTAE PPWRYDPSLY RHLESWETPL PPSDEEPETE ELPTLPLASG  60
STQLLSQTVQ AGGSTSNEGG EFTSLLHQGL GDDDDGGVDL RFGLCSGGAR EASRTFIIDT  120
DPSPRGVQHV VRSRSVGCGG RGGASDDGGK SATYRSPEDQ MLLVRCKREQ DMHLVGLGHN  180
YSRMQTKEWK WDDIAKRMAN AGRPRDVDDC MKKWDNLFQN YKKIQRFQNA SGQPDFFRLS  240
NEERKEHNFK LRIERVLYNE IHAGMVGNHT IFPPNVADTG SPDGVQLPRR GAGGGESVGS  300
EAGGEGFPEE RSFARGSDND AGSGAGGGKR KNARQQALES IADVMDRHGE LMSSTIESSS  360
KRQCSIFTRQ CNILEQEVAG RGRRHVPKAK RVRSDDASAR VPPRVAQGWA AAAGGDYNED  420
FMTEEEQRRP RLQYGRAVGS ALRINAPPKR MLTPPPEAQQ LRARERRTEK AVVVDLGGDD  480
DEPLEKRRQR TCTTATPPPT VVARAAVDER PVKGRLPATP SQPRQRNPGD DGGSVQRGGG  540
REVVADTREV EGETAGVAGA GASGTVAPVV TAREEAAVVA TTREDARGKK KTDREGGEPG  600
SSRVRRGVMT KDLIDRVVLW VDDKAFWMTG EGRRLYNIVH ETREYFVASA SGLPPPAVPR  660
SVVLPKSSTR VARIADQSQL QQAISRATAV ENIALRILHD PAVCAHTIDL SMDLPPWFVG  720
ANIEDRPDDD NMAAHQESTV ICVAHAFRAA VQMGALIDAD FISHDRICRV ADCFRLLLAA  780
CMWIMRMAGD DPRSHYEAFY FASLVAKPTL VAAMHCSFDH RRSVVRAANV VTERLGKANA  840
TLGEYPDYIP QWAPCGIGFR HDASATGLED AKKLDWLGSG LPDDDNNNNG KDDA