PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG65485.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 439aa    MW: 47460.3 Da    PI: 6.7938
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG65485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix331.6e-10184258269
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+   + aL++a+r       +m+++++  k ++ +We+v +++ + g++r+ + C +kw+nl +++kk+ + ++
  GBG65485.1 184 WSVGDTVALVRAKRdqdlyfaSMGHNFGGMKTREWRWEDVRQRLVKLGVQRKVVDCGKKWDNLMQQFKKVHKYQN 258
                 8899999*******88888888888888899**************************************988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MEVGRSSRRQ LPAGGDNLSQ ASGGGGNRNV ASMQGGGRGD VPQRPDWIRL SPASRSGPGT  60
PPGRQREDDG SASGAQVERH GRQSWADARQ ALRQAGVDTI TRGVQELHVD EGGDAAAEEP  120
FNCDDVDDEE DCNSDELPDV RPLGRKARGG GASAKKGSTP SNQRNKRRDD DTGGSDGEGG  180
HNFWSVGDTV ALVRAKRDQD LYFASMGHNF GGMKTREWRW EDVRQRLVKL GVQRKVVDCG  240
KKWDNLMQQF KKVHKYQNLS GGKDYFKLAS SARRSEGFSF VMDRSVFNEM EAMTKGDHTI  300
HPKNLADTGA PGGVQMPAGA GAVGDDIGSE GGGEPVDEDQ GSTKDSRFSG GSGAATGKRK  360
NMRQQTFEVV TDVMEDHGTL MATTMDNASK RQCSMMLRQC QVLKSELELQ RGHNAAADAA  420
NTMMCNALLE IEKAIRDRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-09Trihelix family protein