PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG65541.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 825aa MW: 91005.3 Da PI: 8.661

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG65541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.9	1.2e-08	47	119	2	66
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkike 66 Wt ++ aLi+ +r ++++++r k k +W++v k++ + g+ +r+++ C +kw+nl +++k + + GBG65541.1 47 WTVKHMIALIRPKRdqdlhlaGLGHNSGRMKTKTWKWDDVEKRLVQMGVtSRKAVDCGKKWDNLYQQFKTVLK 119 999*********555555555566667899********99999899***************8755 PP

Sequence ? help Back to Top
Protein Sequence Length: 825 aa Download sequence
MEIRLVGRKR GGSRATNKFT EPRAGRRGKK GVEDTSAGEG AKSRDFWTVK HMIALIRPKR 60 DQDLHLAGLG HNSGRMKTKT WKWDDVEKRL VQMGVTSRKA VDCGKKWDNL YQQFKTVLKF 120 MGESGKPNFF TLTPGERKER GFDFQMDERV YSEMTAMSRG DHTIHPTTLA DTGVAGGVQM 180 ADPRGGRNEY GGNEGCGDGL DDDQGSMRDS MFSGGGGGRG GKQKNVRQQT FDTIADVMKE 240 YRNLMATTVD SASKRPCSIL TRQCDILEEQ LSAIKQSVIV GAAGALPRTP KVAGVVITEA 300 LVPRQLPAVE GQAQPRQPLP LQQTGASGGG KTPSAQKGEA TASGSRKATA SGSRKAAADH 360 STRSRLAEGA EEGRIDDVRR DDGRRDGKRE GDDNDDHPLV TRLKGAEKED DLEERSKLWV 420 DCDTFWRQGP RKPLREAVGD CADYFVAIAD GDAGAEPPSM LIIPPNDVPR FKIEDPAQCE 480 PALRRACSVG KLVLRIVHGW FFKSSSRSIG FARASPSTSL RTSHEQFGRD LNAPKWRGLQ 540 GEGKHRLRKR ARRRRATDHS TRTGLAESAE EGRVDRVRRD DGGRDGKREG DDDDDRPLVT 600 RLKEATKEDS LEEWSKLWVD CDAFWGQGAG KPLREAVGDC ADYFVAIANG DAGAEPSLMP 660 IMSRNDVPRF KIEDPGQREP ALCRARSVEK LVLRTVHGCI FKSSSRSIGF ARAESYITVD 720 FATDVAQAVW QGFKWSKVVS PALVYHTLAM KMDVPLWFAG VKIVDRPEDD DMAARQEATV 780 LRLADCWTYA VWCGQWADET REVVAACGLS SSVVERMDVD HGHGW

Sequence ? help Back to Top

Protein Sequence Length: 825 aa Download sequence

MEIRLVGRKR GGSRATNKFT EPRAGRRGKK GVEDTSAGEG AKSRDFWTVK HMIALIRPKR  60
DQDLHLAGLG HNSGRMKTKT WKWDDVEKRL VQMGVTSRKA VDCGKKWDNL YQQFKTVLKF  120
MGESGKPNFF TLTPGERKER GFDFQMDERV YSEMTAMSRG DHTIHPTTLA DTGVAGGVQM  180
ADPRGGRNEY GGNEGCGDGL DDDQGSMRDS MFSGGGGGRG GKQKNVRQQT FDTIADVMKE  240
YRNLMATTVD SASKRPCSIL TRQCDILEEQ LSAIKQSVIV GAAGALPRTP KVAGVVITEA  300
LVPRQLPAVE GQAQPRQPLP LQQTGASGGG KTPSAQKGEA TASGSRKATA SGSRKAAADH  360
STRSRLAEGA EEGRIDDVRR DDGRRDGKRE GDDNDDHPLV TRLKGAEKED DLEERSKLWV  420
DCDTFWRQGP RKPLREAVGD CADYFVAIAD GDAGAEPPSM LIIPPNDVPR FKIEDPAQCE  480
PALRRACSVG KLVLRIVHGW FFKSSSRSIG FARASPSTSL RTSHEQFGRD LNAPKWRGLQ  540
GEGKHRLRKR ARRRRATDHS TRTGLAESAE EGRVDRVRRD DGGRDGKREG DDDDDRPLVT  600
RLKEATKEDS LEEWSKLWVD CDAFWGQGAG KPLREAVGDC ADYFVAIANG DAGAEPSLMP  660
IMSRNDVPRF KIEDPGQREP ALCRARSVEK LVLRTVHGCI FKSSSRSIGF ARAESYITVD  720
FATDVAQAVW QGFKWSKVVS PALVYHTLAM KMDVPLWFAG VKIVDRPEDD DMAARQEATV  780
LRLADCWTYA VWCGQWADET REVVAACGLS SSVVERMDVD HGHGW