PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG65689.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 517aa MW: 55088.8 Da PI: 6.249

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG65689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.8	5.8e-13	321	396	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + + aLi+a r+ + +l+ r k ++ +W +v+ ++++ g+ r++++C +kw+nl +++kk+ + ++ GBG65689.1 321 WSVDDIIALIRANRDQDAHLQgmghayaRMKPREWKWLDVATRLKKVGVDREANRCGKKWDNLMQQFKKVHHFQGL 396 99**********777666643333336789999********************************9887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MEGRRAISGS AGGSGHSPSN SRRPSERTGH AHLPPHLQPL PDTDDEEGDD RRSRTVPLGS 60 GSTQEWAATE LFGSRDGGKG QSYTELLQQG LSDTDGDGGV NLSFGLGSGR SAAVSRTVVV 120 NPHPDDDGGD VTAVQRSPRS PAPLREASGN NKDPPRQQFR SPSVCGGASA RPQWMQSPSP 180 LSAGSSAGRR LGECRETAPA VADVGDARDG REVWAEQRRL MRSVREESIT RGVQRFLVGE 240 DGHDGEEAVG DAHDPDWNDN GAEGGEDDAG YISPSKQAAA MGGRGGKTKS CAGNGRRGKR 300 TAGRGSDAEG DADGEGGRHF WSVDDIIALI RANRDQDAHL QGMGHAYARM KPREWKWLDV 360 ATRLKKVGVD REANRCGKKW DNLMQQFKKV HHFQGLSGKQ DFFQLSGKDR MSKGFNFNMD 420 RAVYDEILGS TAKNHTINPK NVADTGAQGG VRLLSASSAD PESVGDGDGG AEHDDDDDGS 480 TKDSSQTTGG AGGFGKRKST RQQTFEAMTE CMETHGV

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MEGRRAISGS AGGSGHSPSN SRRPSERTGH AHLPPHLQPL PDTDDEEGDD RRSRTVPLGS  60
GSTQEWAATE LFGSRDGGKG QSYTELLQQG LSDTDGDGGV NLSFGLGSGR SAAVSRTVVV  120
NPHPDDDGGD VTAVQRSPRS PAPLREASGN NKDPPRQQFR SPSVCGGASA RPQWMQSPSP  180
LSAGSSAGRR LGECRETAPA VADVGDARDG REVWAEQRRL MRSVREESIT RGVQRFLVGE  240
DGHDGEEAVG DAHDPDWNDN GAEGGEDDAG YISPSKQAAA MGGRGGKTKS CAGNGRRGKR  300
TAGRGSDAEG DADGEGGRHF WSVDDIIALI RANRDQDAHL QGMGHAYARM KPREWKWLDV  360
ATRLKKVGVD REANRCGKKW DNLMQQFKKV HHFQGLSGKQ DFFQLSGKDR MSKGFNFNMD  420
RAVYDEILGS TAKNHTINPK NVADTGAQGG VRLLSASSAD PESVGDGDGG AEHDDDDDGS  480
TKDSSQTTGG AGGFGKRKST RQQTFEAMTE CMETHGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	4e-09	Trihelix family protein