PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG65952.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 388aa    MW: 41928.7 Da    PI: 9.7665
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG65952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix254.9e-08319388264
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                 W+ +  ++L++ +r        +  +++r k k+ +We+ sk+m+  g  +    C +kw+nl + ykki
  GBG65952.1 319 WSTKDQMLLVRCKReqdmhlvGLSYNYGRMKTKEWKWEDMSKRMANAGRPKDTDDCMKKWDNLFQNYKKI 388
                 7777788888888833333333334455789*************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MGGRRTSNGG HAGTTGCCGQ GGVRSSAVEP RRRYDPSMYT HLESWDTPLP PSDEEPEKEK  60
LSTLPLRLAS GSTQLWLRTV RADRSDPDKG GEFTSLLRQG LRDDDGGGVD LRFGLCSGGG  120
REASRTFIID GDRSARGIKH GGRLHTEQST PRRAAPVTGA VGPSPAGRQH GSTAPSVDRL  180
TPTWPAPPGV AAGLLRMGGA RSLMSACTTP IESGVRDAGT CRAPVRPRPT VENITRGVSS  240
MRTHSDGGED DVGIGDDTGE GMREDMEAGD DDDDFPIRPS GKTAGRGRGR GRGGVRGRSV  300
GRGGRGGVSD DARKSPTYWS TKDQMLLVRC KREQDMHLVG LSYNYGRMKT KEWKWEDMSK  360
RMANAGRPKD TDDCMKKWDN LFQNYKKI