PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66150.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

G2-like

Protein Properties

Length: 868aa MW: 89293.8 Da PI: 4.9613

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.5	5.5e-27	774	828	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++Wtp+LH+rFv+av+qL G +kA+P++ilelm+v++Lt+++++SHLQkYR++ GBG66150.1 774 KVKVDWTPDLHRRFVQAVDQL-GVDKAIPSRILELMGVECLTRHNIASHLQKYRSH 828 5689***************.******************************86 PP
2	Myb_DNA-binding	36.5	1.2e-11	777	826	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT++++ ++v+av qlG + +++I + mg + +t+ ++ s++qky+ GBG66150.1 777 VDWTPDLHRRFVQAVDQLGVDkaIPSRILELMGvECLTRHNIASHLQKYR 826 57******************************999**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence
MLAGTRRARR DKFRHLTNFP IGLRVLLFDE DSHFVEEVRG KLESHGYVVH ACTCREEALK 60 AIRKGVEAGE ANGEGEDEDE EEEEEEEEGD KERAVFHVAL VEAISSGEGI NCFTLLNNAK 120 DMPVILMSGV DNLNLTMLGI AAGAADVLQK PLTDKQIRNV WQHVVRKAIE MGDTSVMRFI 180 APASPVSAAP VPSATTAPPS ATATAATAAA AAAAAAAASS SPLPPSSCRH LSYQPHRHAD 240 QASSPSDRGD EDEAENGDNG EAQDDAGGDG QRKPRRTSSA DRKKRKRPPP PPLCEPGSTI 300 MTDDSSSING SLPSLAYCAG NVPPAGGGGG GGRGAAAAAG GANHVMANGE ARDALITEAS 360 GLHLIAPKEE QIDYDEEDRI LTGESFAEPV SLDHLFGSVD SRDNFEMNSV LEGSSPPDSD 420 SSVGMFAHLH VESVNRGGGV FLANGGMERE AIGGGGGGGE GEAEGGRGGG GGRKKKGGVQ 480 EEESMQAEEM GERRGGEDDD FQMMGVEVGE FVGGGGGIGG DCKRVNVAPS AAGNDTIDMR 540 KNAIRRAGGG GGGGGGGGGE IMGREEGVGD LDDDARIMLV VSENGNLGSP RVSHSMGGQR 600 RAVVFSSHEA WSELSCGSLC GGGGGGGGGG GGGEVVRDSM GTRRDEVDGM RLETDGGGRE 660 GGGGEREHSP EAEGVDLLRG RGGGGGGGGG GGGRHSTVVM GDDPQKSVDS RRRGVEAKGE 720 TCEDSSRGET TPNGTKPTTA SSAGGGGGGG GGGGGGGGGG GGKGNPASSS GRRKVKVDWT 780 PDLHRRFVQA VDQLGVDKAI PSRILELMGV ECLTRHNIAS HLQKYRSHLR HLAAREAEAA 840 SWHHRRPLDP NVWAARPRWD GTSWVYYT

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence

MLAGTRRARR DKFRHLTNFP IGLRVLLFDE DSHFVEEVRG KLESHGYVVH ACTCREEALK  60
AIRKGVEAGE ANGEGEDEDE EEEEEEEEGD KERAVFHVAL VEAISSGEGI NCFTLLNNAK  120
DMPVILMSGV DNLNLTMLGI AAGAADVLQK PLTDKQIRNV WQHVVRKAIE MGDTSVMRFI  180
APASPVSAAP VPSATTAPPS ATATAATAAA AAAAAAAASS SPLPPSSCRH LSYQPHRHAD  240
QASSPSDRGD EDEAENGDNG EAQDDAGGDG QRKPRRTSSA DRKKRKRPPP PPLCEPGSTI  300
MTDDSSSING SLPSLAYCAG NVPPAGGGGG GGRGAAAAAG GANHVMANGE ARDALITEAS  360
GLHLIAPKEE QIDYDEEDRI LTGESFAEPV SLDHLFGSVD SRDNFEMNSV LEGSSPPDSD  420
SSVGMFAHLH VESVNRGGGV FLANGGMERE AIGGGGGGGE GEAEGGRGGG GGRKKKGGVQ  480
EEESMQAEEM GERRGGEDDD FQMMGVEVGE FVGGGGGIGG DCKRVNVAPS AAGNDTIDMR  540
KNAIRRAGGG GGGGGGGGGE IMGREEGVGD LDDDARIMLV VSENGNLGSP RVSHSMGGQR  600
RAVVFSSHEA WSELSCGSLC GGGGGGGGGG GGGEVVRDSM GTRRDEVDGM RLETDGGGRE  660
GGGGEREHSP EAEGVDLLRG RGGGGGGGGG GGGRHSTVVM GDDPQKSVDS RRRGVEAKGE  720
TCEDSSRGET TPNGTKPTTA SSAGGGGGGG GGGGGGGGGG GGKGNPASSS GRRKVKVDWT  780
PDLHRRFVQA VDQLGVDKAI PSRILELMGV ECLTRHNIAS HLQKYRSHLR HLAAREAEAA  840
SWHHRRPLDP NVWAARPRWD GTSWVYYT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	272	288	RKPRRTSSADRKKRKRP
2	281	288	DRKKRKRP
3	282	287	RKKRKR
4	465	472	GGRGGGGG
5	656	663	GGRGGGGG
6	657	664	GGRGGGGG
7	681	694	RGGGGGGGGGGGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	2e-28	G2-like family protein